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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885166.1_cds_XP_016439174.1_34754
CDS Infomation

[gene=LOC107765081] [db_xref=GeneID:107765081] [protein=synaptotagmin-5-like] [protein_id=XP_016439174.1] [location=join(28662..28766,28860..28964,29323..29373,29633..29753,33029..33150,33501..33602,33876..33950,34382..34461,35287..35437,35529..35759,36891..37172,37277..37390,37565..37708)] [gbkey=CDS]
Sequence

ATGGGTTTGTTGGTGGGGTTCTTCTTAGGTGCTGCATTGGGTGTTGGTCTAATAGTTTGT
TTTGCTCGTTTTCAAAATTACAGATCCAAAGCTCGCATTGATTTGGCAAAAGTCATAGCA
GCATTTGCCAGGATGACAGTTCAAGATTCAAGAAAACTTCTTCCTCCTGAAGCATATCCT
TCTTGGGTTGTCTTTTCACAGAAGCAAAAGTTGAATTGGCTTAACCAGCACTTAGAAAAA
ATTTGGCCTTATGTTGATGAGGCAGCATCAGAGTTGATAAGAACATCTGTTGAGCCAGTT
CTTGAGCAATATAGACCATCTATCTTATCTGCTCTCAAATTTTCAAAGCTCACATTGGGT
ACTGTGGCTCCATCCTTCACAGGAGTTTCCATTATTGATGGTGATCCTGGGGAAATTATT
ATGGAATTGGAAATGCAGTGGGATGGAAATCCCAATATTGTGCTCGATATTAAGACTTTA
GTTGGCGTAGCGCTACCTATACAGGTCAAGAATATTGGATTCACGGGGGTTTTCCGGTTG
ATATTCAAACCACTAGTTGCTGAGCTTCCTTGTTTTGGAGCGGTTTGCTACTCTTTGCGT
CAAAAGAAAAATCTGGATTTCACTCTCAAAGTTGTGGGTGGTGATATCTCGGCTCTTCCT
GGAGTATCTGATGCCATTGAGGGCACAATACGAGATGCAATTGAAGATTCTATCACTTGG
CCTGTCCGCAAAATCGTTCCCATATTACCAGGAGACTATAGTGACCTGGAGCTAAAGCCG
GTTGGTATATTACAAGTCAAGCTCATCGAAGCCAAAGAGTTGACTAATAAAGACATCATT
GGGAAGTCTGATCCTTTTGTTGAGTTGTTTATACGTCCACTACGTGACAGGACAAAGACC
AGCAAAGTTATTGATAATTGCTTAAATCCAATCTGGAACGAGCACTTTGAGTTCATAGTT
GAAGACATATCTACTCAACATTTAACAATTAGAGTATATGATGATGAGGGGATTCAGGCA
GCTGAATTCATTGGTTGTGCTCGAATAGATTTGAAAGACCTAGAGCCCGGTAAAGTGAAG
GATGTGTGGTTAAAACTGGTGAAGGATCTGGAGATACAAAGGGACAACAAAAACCGAGGA
CAGGTACATTTGGAGCTTCTCTTTTGTCCTTTTGGTATGGATAGCGTGTTTATGAAGGGA
TTTAAACCCGACTATGCACTAACTACCTTGGAAAAGGCTCTTAGACCAGAGTCAGCTAAT
TTTTCACAAGCTGTCTCTGAGAAGAAAGGGGACATCCTCTTTAGAGGAGTTCTTTCAGTG
ACGGTAATATCAGCAGAAGACGTACCTGTTACTGATCTAATGGGGAAGTCTGATCCCTTT
GTTGTACTAATTATGAAGAAATCTGAACAGAAAAATAAGACCAGAGTTCTAAACAACACC
CTTAATCCAGTGTGGAACCAGACATTTGACTTTGTAGTTGAAGATGGATTACATGATTTG
CTCATATTGGAAGTTTGGGACCATGACACATTTGGGAAGGATAAAATTGGTAGATGCATC
ATGACTCTCACAAGAGTTATACTAGAAGGGGAATTCAAAGATACCTTCACCCTTGATGGT
TCCAAGTCGGGGAGATTAACCGCTCATCTTAAATGGACACCACAACCAATAATTCGAGAT
TGA

Peptide Sequence

PEP ID

XP_016439174.1
PEP Infomation

PREDICTED: synaptotagmin-5-like [Nicotiana tabacum]
Sequence

MGLLVGFFLGAALGVGLIVCFARFQNYRSKARIDLAKVIAAFARMTVQDSRKLLPPEAYP
SWVVFSQKQKLNWLNQHLEKIWPYVDEAASELIRTSVEPVLEQYRPSILSALKFSKLTLG
TVAPSFTGVSIIDGDPGEIIMELEMQWDGNPNIVLDIKTLVGVALPIQVKNIGFTGVFRL
IFKPLVAELPCFGAVCYSLRQKKNLDFTLKVVGGDISALPGVSDAIEGTIRDAIEDSITW
PVRKIVPILPGDYSDLELKPVGILQVKLIEAKELTNKDIIGKSDPFVELFIRPLRDRTKT
SKVIDNCLNPIWNEHFEFIVEDISTQHLTIRVYDDEGIQAAEFIGCARIDLKDLEPGKVK
DVWLKLVKDLEIQRDNKNRGQVHLELLFCPFGMDSVFMKGFKPDYALTTLEKALRPESAN
FSQAVSEKKGDILFRGVLSVTVISAEDVPVTDLMGKSDPFVVLIMKKSEQKNKTRVLNNT
LNPVWNQTFDFVVEDGLHDLLILEVWDHDTFGKDKIGRCIMTLTRVILEGEFKDTFTLDG
SKSGRLTAHLKWTPQPIIRD

Transcript Sequence

Gene sequence data has not been registered.